Insertion junction: CLIP2.011269_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011269
Chromosome:chromosome 6
Location:7062779
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297650 UBC36 (1 of 1) K10582 - ubiquitin-conjugating enzyme E2 Q (UBE2Q); E2 ubiquitin conjugating enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTCGTTGGCCACGTGCGGGCTGGCATGACATAGCCAGCGTGGGTCGG
Internal bar code:GGGGGCGACTCCGGTGTCGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3720
LEAP-Seq percent confirming:68.9655
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCCTGCATGTTGTCAAAC
Suggested primer 2:TCCGGCTTGGTCTCTTCAAC