Insertion junction: CLIP2.011272_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011272
Chromosome:chromosome 14
Location:449147
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610750 MAE16 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAGATCCCCTTCGTGACCCGTGCTCCGCCTCCCTCTGCCTCTCCCTCC
Internal bar code:ATCATTTTCATTGTGCTATCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:250
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCAAACATCCCAAACCAC
Suggested primer 2:AGCATCACGTTCTGGGTCTG