Insertion junction: CLIP2.011282_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011282
Chromosome:chromosome 7
Location:1349294
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g322650 CSA1 Chlorophyceae-specific gene family A protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCGGCGCCGGTCCAGTCAATGGGGCGGAAGACGAGGGTGGCGGCGTG
Internal bar code:ACTATCTTGGAAAAAGCGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1185
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACACACACGAACACACA
Suggested primer 2:AATCGGTCCAGAAAGCCCAG