Insertion junction: CLIP2.011288_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011288
Chromosome:chromosome 8
Location:3238949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376950 MMP14 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTATTCTCGCGCTGGCACTGCCGCGAGGCATTCACTGCGGGCGCAAGAA
Internal bar code:GTTACATGTCTGTCGAGGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1520
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCCGTCTTTGGGCCCTTA
Suggested primer 2:ATCGAGGCCTTTGGAACCTG