Insertion junction: CLIP2.011290_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011290
Chromosome:chromosome 12
Location:6021347
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534550 PHR4 (1 of 1) PTHR11455:SF2 - BLUE-LIGHT PHOTORECEPTOR PHR2; Putative photolyase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGCTTCACGCCACGTCGCGTACCTCGTCTTTGTAATTGCCTTCCCATA
Internal bar code:TGACGAATCTAGGGTGTGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:6032
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCTGTTTCCCGACACTC
Suggested primer 2:GGCAGCGACATGATAGACGA