Insertion junction: CLIP2.011290_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011290
Chromosome:chromosome 12
Location:6021348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534550 PHR4 (1 of 1) PTHR11455:SF2 - BLUE-LIGHT PHOTORECEPTOR PHR2; Putative photolyase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTCGCCCCAATGTACTCCTCGGCACCGACCGGGCTGCACTGGGCTGT
Internal bar code:AGAGGTGTGCCTTGGCGTCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1641
LEAP-Seq percent confirming:69.5652
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGCGACATGATAGACGA
Suggested primer 2:CCTCCTGTTTCCCGACACTC