Insertion junction: CLIP2.011295_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011295
Chromosome:chromosome 17
Location:6495423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g744497 (1 of 1) PF09783 - Vacuolar import and degradation protein (Vac_ImportDeg) intron
lncRNA_TCONS_00240303 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCCTTACCTCGTCACATCTGTACGTGGGCCCACCCACCGCGCCACGA
Internal bar code:GGTCATCCAGATTGTAATTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1889
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTTCCGTTTGACAAGCC
Suggested primer 2:GTGAACGGGAAACACACAGC