Insertion junction: CLIP2.011305_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011305
Chromosome:chromosome 2
Location:1437723
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g083550 (1 of 1) PF01494//PF05834 - FAD binding domain (FAD_binding_3) // Lycopene cyclase protein (Lycopene_cycl) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTGCTTATGCTGCCGAAACCCATGGCCGTGACGCTGATCTAAGGCGC
Internal bar code:GCTCACGCGTTAATTCAATATC

Confirmation - LEAP-Seq

LEAP-Seq distance:174
LEAP-Seq percent confirming:30.2326
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTTGATGTGGTTGTGGC
Suggested primer 2:GGTGCATGTGTGTAGGTGGG