Insertion junction: CLIP2.011305_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011305
Chromosome:chromosome 17
Location:1883494
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709700 (1 of 16) IPR011044 - Quinoprotein amine dehydrogenase, beta chain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACGGTTACGACGCTGCCAGAACCCCCAGTCCACCATGTGGCTGCACCA
Internal bar code:ATCGTCAGATGATGCATTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1129
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTGTAGGCTGCTGTACA
Suggested primer 2:GAAGGGTACACAGGAACGGG