Insertion junction: CLIP2.011309_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011309
Chromosome:chromosome 1
Location:7153280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g051211 MAE9 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACGAGGCCACTGCGGTGAGCGCCGTACGTACGTGTGTCAGTACTGTA
Internal bar code:AGGAAAGTCAGGGTCCTCTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1269
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTCTAGCCCATCACTCG
Suggested primer 2:ATGTGTGTGCGTGTTCATGC