Insertion junction: CLIP2.011310_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011310
Chromosome:chromosome 14
Location:1661679
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g618750 FAP246 Flagellar Associated Protein 246; (1 of 1) IPR001611//IPR002048//IPR002931//IPR003591 - Leucine-rich repeat // EF-hand domain // Transglutaminase-like // Leucine-rich repeat, typical subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGCTCTTGGAAAGGTAGGCGCCTGCAGCCGCCCAAGACAGTCCGCGG
Internal bar code:AAAGTTATGGGCAGATCTTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:270
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCCTCCTGCCATACTCAT
Suggested primer 2:CTATGGCACCAGTCGCATGA