Insertion junction: CLIP2.011313_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011313
Chromosome:chromosome 13
Location:2657814
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581300 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCCATTGCCACTGACGCGCAGTGACTCAAGCGCCTGTGCCACACTGC
Internal bar code:TGTGAGCGTCCGGTACAATGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3112
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCACTCCCACTACGACC
Suggested primer 2:CGAGAGTAGTAGCTGCGTGG