Insertion junction: CLIP2.011318_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011318
Chromosome:chromosome 12
Location:3072822
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501250 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGGCGTCGTGCGGTGCCACGTGAACCCGCTGGGCCTCACCACGTAT
Internal bar code:TGACTTATCGCGCCTTTGCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1176
LEAP-Seq percent confirming:68.1818
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGGGAGGAGAGACACAG
Suggested primer 2:TTACAGGTGTCGTCTTGCCC