Insertion junction: CLIP2.011321_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011321
Chromosome:chromosome 3
Location:6429380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193000 HAD5 Halo-acid dehalogenase-like hydrolase; (1 of 1) 3.1.3.29 - N-acylneuraminate-9-phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGCGGTCACCTCCATGCCCGGCGGCGCCACCAGTGCGTAGTCCCGCT
Internal bar code:TATTCTCTAACCTTGGTAGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3250
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAGCTAGCTAGGAGTCG
Suggested primer 2:GATCCGGCATGGTCCTAGTG