Insertion junction: CLIP2.011321_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011321
Chromosome:chromosome 3
Location:6429380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193000 HAD5 Halo-acid dehalogenase-like hydrolase; (1 of 1) 3.1.3.29 - N-acylneuraminate-9-phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTGCCGCCGGCATCGTGGGTTGTGGTACCGGTGTTAAAGTGCACGAAG
Internal bar code:TATTCTCTAACCTTGGTAGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1372
LEAP-Seq percent confirming:77.9221
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCGGCATGGTCCTAGTG
Suggested primer 2:GGCAAGCTAGCTAGGAGTCG