Insertion junction: CLIP2.011329_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011329
Chromosome:chromosome 12
Location:4605471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521851 (1 of 3) PF04982 - HPP family (HPP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGTAGGCGTGCAGGGGGGCGGTGGTTGCGCGAAGTGGGGTTCTAATT
Internal bar code:TGGAAAAACTGATAGGGCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1433
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCTCATCGCGTCATTTG
Suggested primer 2:CTGCTGTTGGTTTTGGTCCG