Insertion junction: CLIP2.011338_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011338
Chromosome:chromosome 7
Location:1894796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325744 (1 of 1) PTHR19277//PTHR19277:SF102 - PENTRAXIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCATGGGGTGGAAGGGTGGAAAGGGGAAGGCGTGTGTAGGCGCGGAAG
Internal bar code:AAGAGAAACGATGTACTTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1250
LEAP-Seq percent confirming:47.0588
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGCTGTGCTTATCATGC
Suggested primer 2:TTGTCCTCCGACTTGCTGTC