Insertion junction: CLIP2.011342_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011342
Chromosome:chromosome 11
Location:1011259
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTGCAGTGTAAATCTGTTCGGCAGTTCGGCTGTGTGTTCGGTCCCGC
Internal bar code:ACGCCTTAATGGCAACCGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:516
LEAP-Seq percent confirming:11.7647
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAATTCGAGGCATGCACGAG
Suggested primer 2:CAAGGAAGAAGAGGCCCCAG