Insertion junction: CLIP2.011351_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011351
Chromosome:chromosome 15
Location:861208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640250 (1 of 1) K07562 - nonsense-mediated mRNA decay protein 3 (NMD3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTGTTTGGGTTTTGGGGGCGTGGCGTGAGGGTTCGGGTTGGGGGGCG
Internal bar code:TGCAGTGATTGCGCACACTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:331
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACACGTGCACAACTTCC
Suggested primer 2:CAGGTGGGCTTCTTGGAGAG