Insertion junction: CLIP2.011353_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011353
Chromosome:chromosome 16
Location:1521216
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653200 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAAAGCTAGTGTGTGTGAGAAGCAAGTTTGTCACACACAATTGGTACG
Internal bar code:GTTTTTCGATGATACGTCGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1138
LEAP-Seq percent confirming:48.3871
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TTACTGCCACCGTCACCATC
Suggested primer 2:AGTGAGCATGTGTACGGCAA