Insertion junction: CLIP2.011355_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011355
Chromosome:chromosome 5
Location:1413462
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234640 (1 of 1) IPR000048//IPR011989//IPR016024 - IQ motif, EF-hand binding site // Armadillo-like helical // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATGTGTGGAGCTGTATTCTCACCAATTGTATCATTCGCCTTGGTCCGC
Internal bar code:GCGATGAGGTCCGTGGTTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1295
LEAP-Seq percent confirming:44.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCAAGCACCAGGTTCAC
Suggested primer 2:CGTGGGTGAGTGCAAACTTG