Insertion junction: CLIP2.011360_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011360
Chromosome:chromosome 6
Location:3533575
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800658 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGGTTGAGACCTGCCGGTGTTGTCTGGTTAGCGACCTGTGCTGACGA
Internal bar code:GGGCGGTGCCAGTGGACGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4015
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GATACGAGCACTGAGGGACG
Suggested primer 2:CGCCCTGTTTGCATGTTGAA