Insertion junction: CLIP2.011374_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011374
Chromosome:chromosome 2
Location:2716448
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g093550 CYG44 (1 of 1) IPR000014//IPR001054//IPR029787 - PAS domain // Adenylyl cyclase class-3/4/guanylyl cyclase // Nucleotide cyclase; Adenylate/guanylate cyclase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATGGCGGAAAGGCTAGGTTCATCCTGGTATTGCAGGTGGGGTCCGGA
Internal bar code:TTAATTCATGAAGTTCGCGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1694
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGAGTGAAGCATGCAGT
Suggested primer 2:CATATGCCACGCAGGTTTCG