Insertion junction: CLIP2.011375_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011375
Chromosome:chromosome 9
Location:450288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g800980 (1 of 4) 1.1.1.3 - Homoserine dehydrogenase intron
Cre18.g749397 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCAGCAGCTGCGTGATGCGACCCAGCACACCTCCAGGAGACAGCGAC
Internal bar code:CTGAGTATAGTGTCGTTCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3596
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:142
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:142

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGGCAGCAATGTGTACA
Suggested primer 2:GTGTAGGTATCCAGAGCCGC