Insertion junction: CLIP2.011382_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011382
Chromosome:chromosome 6
Location:7948330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304300 POA6 20S proteasome alpha subunit F; (1 of 1) K02725 - 20S proteasome subunit alpha 6 (PSMA1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTCGTCGGTTGGACGACGGCGTATGAGGGAGCGGCGGGTTGCTAACC
Internal bar code:TCGCACGAGGTGCAAGGAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1533
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCCCCACCACCACATAA
Suggested primer 2:CATTGCACGCCGATCTCTTG