Insertion junction: CLIP2.011386_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011386
Chromosome:chromosome 3
Location:7957159
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g202150 DMC2 (1 of 6) 2.1.1.37 - DNA (cytosine-5-)-methyltransferase / Type II DNA methylase; Putative DNA methylase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAGAACGTTTTGGATGGGTGCACCCTGAGCATGCATCCCATATGCATG
Internal bar code:GTTTTGGTGTATGTAGGCTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3712
LEAP-Seq percent confirming:39.2857
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAAATGCACCCACCTGG
Suggested primer 2:CAGGACGTATGCTACCCGAC