Insertion junction: CLIP2.011396_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011396
Chromosome:chromosome 9
Location:5234571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407050 MMP24 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGCAGACCCCGCTGGGCGTTGGGATTAAACATAACACATCGCTAGA
Internal bar code:CTATGCACGTTTTGCGCGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1091
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACTCGTCCGTGATGAGG
Suggested primer 2:GTAGTGGATGTGGGTGTGGG