Insertion junction: CLIP2.011400_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011400
Chromosome:chromosome 17
Location:3246249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721750 ELG9 Exostosin-like glycosyltransferase 9; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGCTGTTAGTGCCGGTGCTTGCAAGAGAGAGGGCTGCAGCAGCAACC
Internal bar code:ATTTAACTTGCCGTTGCACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1751
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:ACATTGGTCATGGCGTGCTA
Suggested primer 2:AATGTGCTGAGCCTGACGAA