Insertion junction: CLIP2.011400_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011400
Chromosome:chromosome 17
Location:3246257
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721750 ELG9 Exostosin-like glycosyltransferase 9; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGCCGCCGCCACCACCCGGCCCCCACGCACTGCGAGATGGGGTTGTC
Internal bar code:GCGTCGAGGACTGAGAGACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:753
LEAP-Seq percent confirming:11.5385
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AATGTGCTGAGCCTGACGAA
Suggested primer 2:ACATTGGTCATGGCGTGCTA