Insertion junction: CLIP2.011406_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011406
Chromosome:chromosome 2
Location:7204150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390801 (1 of 1) PTHR11918//PTHR11918:SF77 - RADICAL SAM PROTEINS // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCAGCCCCACGGCACCCGAGGGCCCCGCCGCCAGCCCAGTCCTGCCCC
Internal bar code:GGTGAAATAATCGTAGCCTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:435
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACAGTCCTTGCCCCTTG
Suggested primer 2:GCTGTCCTGCTCCGACTATC