Insertion junction: CLIP2.011407_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011407
Chromosome:chromosome 5
Location:2869490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241450 FTSY1,FTSY (1 of 1) K03110 - fused signal recognition particle receptor (ftsY); Chloroplast SRP Receptor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGGAAAAGGGTCGATACCATTTAAATGCGTGGGGTTGCGGCGTTGTAT
Internal bar code:CTGATCCTGATAGTATTGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:400
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CATGACTGCAACCCAACTGC
Suggested primer 2:CCACAGGCCTCAACATGCTA