Insertion junction: CLIP2.011409_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011409
Chromosome:chromosome 3
Location:5901270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188750 HEL21 (1 of 1) K13177 - ATP-dependent RNA helicase DDX1 [EC:3.6.4.13] (DDX1); DEAD/DEAH box helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGATCTTGCCGCTCTCCACGAAGTCGATCACGCGGCCGGGTGTGCCCAC
Internal bar code:AGTCCGTTATCAAGTTTAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3132
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CATAACGCTCAAGAACGCCG
Suggested primer 2:AAGGTGTGCGGTGTACAGAG