Insertion junction: CLIP2.011411_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011411
Chromosome:chromosome 10
Location:1167843
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425750 (1 of 1) PTHR11227:SF18 - WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 CDS
lncRNA_TCONS_00063058 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCAGGGTAAGGCTCCATGGGCCTAACGTCGCCCAACGCTCACGAAAT
Internal bar code:AGTTGGGGGTGTTGGCAGAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:543
LEAP-Seq percent confirming:51.5152
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGAGATGGGAGGAGGGAC
Suggested primer 2:CCCAATGCACTTCCCCTGAT