Insertion junction: CLIP2.011411_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011411
Chromosome:chromosome 10
Location:1167847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425750 (1 of 1) PTHR11227:SF18 - WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 CDS
lncRNA_TCONS_00063058 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCACGTAGGATTCAACCAGGTAAGTCCAGGGCATCAGTGGAGCTGGCC
Internal bar code:GATGTTGAGCTGTTGATGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:714
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAATGCACTTCCCCTGAT
Suggested primer 2:AGTGAGATGGGAGGAGGGAC