Insertion junction: CLIP2.011416_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011416
Chromosome:chromosome 2
Location:6241827
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387100 CGL12,PTST1 (1 of 5) PTHR10343 - 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT; Protein targeting to starch 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTCCTTGCTTTCGTGGTTGTAGGGTGAGACCAACAACATCCTCATCG
Internal bar code:CATTATGGTGAGCCTGATAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2976
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:AATCAGAGTGTCCCAAGCCG
Suggested primer 2:ACACAACCCTTCCACTTGCA