Insertion junction: CLIP2.011416_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011416
Chromosome:chromosome 2
Location:6241828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387100 CGL12,PTST1 (1 of 5) PTHR10343 - 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT; Protein targeting to starch 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAGAACACATGACGCTTAAACTTGGTACTGCACACTTAGTGCAATAGA
Internal bar code:ATAGAGATTATGAAACAATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3029
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:ACACAACCCTTCCACTTGCA
Suggested primer 2:AATCAGAGTGTCCCAAGCCG