Insertion junction: CLIP2.011417_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011417
Chromosome:chromosome 10
Location:6633623
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466150 (1 of 8) PF00560 - Leucine Rich Repeat (LRR_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGCGACTGTAGCATAGACTAGTAGGCTGGGGGGATTGGGTGGACAGCG
Internal bar code:CAGACTATCTTTACGGTGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:825
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGATCCAAAGTCCAGCA
Suggested primer 2:GGGTATTGGGCAATGGTGGA