Insertion junction: CLIP2.011417_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011417
Chromosome:chromosome 10
Location:6633633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466150 (1 of 8) PF00560 - Leucine Rich Repeat (LRR_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCGCTTTCTCCTTCTATAGGCTCTCGGCGAGAAAATGACCTGTTTCG
Internal bar code:GAACGAGCAATATTCTGGACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1389
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTATTGGGCAATGGTGGA
Suggested primer 2:CGTGGATCCAAAGTCCAGCA