Insertion junction: CLIP2.011418_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011418
Chromosome:chromosome 11
Location:4240961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481866 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron
lncRNA_TCONS_00166208 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTTCCGTCTTACCACGGACGCCGAGCAGCCCATCACATGTGTTTCTCA
Internal bar code:GTATGAGGTGATTGCGACATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:795
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACATAGCAGGGCCTCTG
Suggested primer 2:GATGAGGTGTGAGAGAGGCG