Insertion junction: CLIP2.011434_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011434
Chromosome:chromosome 9
Location:2047272
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g396550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAATCGTGAATCCGAAGGATCGCCGATTGCAACGTGTGTGGTTTATCGG
Internal bar code:GGTTAAGACTGGTAAAATTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2039
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAATCGTTGATGCCAGCG
Suggested primer 2:CACGGAGAACCTGATTGCCT