Insertion junction: CLIP2.011446_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011446
Chromosome:chromosome 2
Location:1825421
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g087000 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCCACCTTCTGAACCTGCTGCTGCGGCAGCGGTGGCGGCGGCCCGC
Internal bar code:GGCGTGGAACTTGAATACCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4157
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATGTTCTCCGAAGCCTC
Suggested primer 2:GCCGTCGCTTTTCAGGAATG