Insertion junction: CLIP2.011449_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011449
Chromosome:plastome
Location:39595
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCACTGACGTCCCGAAGGGGAAGGGGAAGGACGTCCCCTTACGGGAAT
Internal bar code:GATAGGCAGAGGAGATCGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:289
LEAP-Seq percent confirming:4.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCGCTAACCCCTAACGG
Suggested primer 2:GTAAACCCCTTCCCCTTCGG