Insertion junction: CLIP2.011451_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011451
Chromosome:chromosome 9
Location:1549413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801001 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTGAGTCACAAAGCCCACCCCGACAATTAGCACATCCAACTGCACCC
Internal bar code:ATCGTTCTCAAAGGGCCATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:919
LEAP-Seq percent confirming:57.5758
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGCATCCACTACCTGTAC
Suggested primer 2:TGCGCAGTTGTGAAGTTGTG