Insertion junction: CLIP2.011453_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011453
Chromosome:chromosome 1
Location:5543345
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039500 FAP89 Flagellar Associated Protein 89; (1 of 3) PTHR22847:SF361 - JOUBERIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTAGGCCTCTGGAGTTGACTAACAGAGTGAGCCGCATAGCGGGGTCGCA
Internal bar code:GTCTTAGTTCGTCATGAAGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1626
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCCGGTACACCAGGATG
Suggested primer 2:TGATCCGCGTGTTTGTGGTA