Insertion junction: CLIP2.011453_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011453
Chromosome:chromosome 1
Location:5543345
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039500 FAP89 Flagellar Associated Protein 89; (1 of 3) PTHR22847:SF361 - JOUBERIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTGCTTCCACACGCTCCTGACAGCACACACAAGCCCTCTACCTCTCC
Internal bar code:GTCTTAGTTCGTCATGAAGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1373
LEAP-Seq percent confirming:93.0233
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCCGCGTGTTTGTGGTA
Suggested primer 2:CTGTCCGGTACACCAGGATG