Insertion junction: CLIP2.011459_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011459
Chromosome:chromosome 10
Location:1450606
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428150 (1 of 1) PTHR10566:SF58 - PROTEIN D2023.6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATCCAGAACCAAAAGGCCTCGCGGCAGCCGGCCGCCGCAGACCGCAC
Internal bar code:ACTTCTCAAAATAAACCATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:765
LEAP-Seq percent confirming:60.8696
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCTGCCCGCACTACAAA
Suggested primer 2:TGTTTTAAGGCGCAACACCG