Insertion junction: CLIP2.011461_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011461
Chromosome:plastome
Location:4956
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802264 petD,ChreCp002,2717021 cytochrome b6/f complex subunit 4; (1 of 1) K02637 - cytochrome b6-f complex subunit 4 (petD) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCTAATTTTGCTTTTAAAACTGGATCGCTTAAATCAGGTTTTTTAGTA
Internal bar code:GGTTCGGAATGCGTGACCGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:79
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTTCGGGCAAGTAAACT
Suggested primer 2:AGCGATTGGACGACGGTATG