Insertion junction: CLIP2.011473_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.011473
Chromosome:chromosome 1
Location:2606603
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g015500 CGL91 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGCCATCAATGCACGTGCGTGACCGCCGCTCCTGGTTGCCGAGACGA
Internal bar code:ATTTAGCTGAACAACGGGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:598
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGAAACGGAAGCGTACT
Suggested primer 2:GCCTTGAATTGGGCGTGAAG