Insertion junction: CLIP2.011477_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011477
Chromosome:chromosome 4
Location:42270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214097 (1 of 1) 3.2.1.162 - Lambda-carrageenase / Endo-beta-1,4-carrageenose 2,6,2'-trisulfate-hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTGTTTGTGTGTGGGGCAAGTTCATCAGATGGTGGGCTTTGACGTGC
Internal bar code:GGAGAGTTGAACTAAATTATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:172
LEAP-Seq percent confirming:2.85714
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACACACACACACACACA
Suggested primer 2:AGATGGGTGAGATCCAGGCT