Insertion junction: CLIP2.011481_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011481
Chromosome:chromosome 17
Location:3381471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723100 (1 of 10) PTHR31867:SF1 - EXPANSIN-A1-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCGGCGGCAATCCCAGGCGCGCCGTCGCACCACAGCCGCTCGCAGCA
Internal bar code:GCAGTGAGGTCGGATGCCCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4139
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCAGGTGTCGGAGATAG
Suggested primer 2:TGTAAGGTGGCAGACGGAAC